Michael Jardine
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Module 3, Lecture 2 Outline: • Factor analysis • PCA • Case study – beer • Process for interpreting outputs

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Michael Jardine
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BIOL2022 L20 Fishing expiditions: PCA and CCA

Frage 1 von 10

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PCA stands for ( Principle, Principal, Parametric, Post-hoc ) ( Component, Components, Correlate, Correlates, Criterion, Criteria ) ( Analysis, Analyses, Asshole, Arsehole, Array, Arrays ).

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Frage 2 von 10

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CCA stands for ( Canonical, Correlate, Correlation, Correlates, Correlations, Component, Components ) ( Canonical, Component, Components, Correlate, Correlation, Correlates, Correlations, Criterion, Criteria ) ( Analyses, Analysis ).

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Frage 3 von 10

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The term representing the amount of original variance explained by a new derived variable is:

Wähle eine der folgenden:

  • Eigenvalue

  • Eigenvector

  • Eigenvalues

  • Eigenvectors

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Frage 4 von 10

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The term representing weights showing how much each original variable contributes to each newly derived variable is:

Wähle eine der folgenden:

  • Eigenvalue

  • Eigenvector

  • Eigenvalues

  • Eigenvectors

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Frage 5 von 10

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The following information about PCA is True or False:
First principal component – the vector on which the most data variation can be projected.
Second principal component – vector perpendicular to the first, chosen so it contains as much of the remaining variation as possible.

Wähle eins der folgenden:

  • WAHR
  • FALSCH

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Frage 6 von 10

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The following information about PCA is True or False:
First principal component – the vector on which the most data variation can be projected.
Second principal component – Second best possible vector, chosen to account as much variation as possible, but less good fit than the First.

Wähle eins der folgenden:

  • WAHR
  • FALSCH

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Frage 7 von 10

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When to use PCA:
You have a set of ‘p’ ( continuous, class, nominal, explanatory ) variables.
You want to repackage their variance into ‘m’ components.
You want ‘m’ to be ( <, ≤ (<=), >, ≥ (>=), == ) ‘p’.
Each component could/should/might explain different things.

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Frage 8 von 10

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Covariance or Correlation Matrix.
If units of x and y are different, use a matrix (as it standardises the units).
If units of x and y are the same (e.g. temperature) or with similar orders of magnitude, use a matrix (although you may need to standardise units).

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    correlation
    covariance
    similarity
    dissimilarity

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Frage 9 von 10

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In regards to the scree plot, a component with eigenvalue < 1 captured less than what?

Wähle eine der folgenden:

  • 1 variable’s worth of variance

  • 1% of the total variance

  • 1 average component's worth of variance

  • 1% of the (1st) principal component's variance

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Frage 10 von 10

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Rotations, orthogonal vs oblique.
Varimax is an example of ( Orthogonal, Oblique ), meaning it ( does not, does ) allow for factors to correlate.

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