Protein-DNA Interactions- DNA Repair

Beschreibung

Structural Basis for Biological Function (DNA-Protein Interactions) Quiz am Protein-DNA Interactions- DNA Repair, erstellt von gina_evans0312 am 24/12/2013.
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Quiz von gina_evans0312, aktualisiert more than 1 year ago
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Erstellt von gina_evans0312 vor fast 11 Jahre
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Zusammenfassung der Ressource

Frage 1

Frage
Which of the following are caused by hydrolysis?
Antworten
  • Nicks
  • Abasic Sites
  • Cross Links
  • Ds Breaks

Frage 2

Frage
Which of the following are caused by Radical Oxygen Species?
Antworten
  • Bulky alkylation damage
  • Abasic sites
  • ds breas
  • ss breaks
  • Nicks

Frage 3

Frage
What causes Alkylation Damage?
Antworten
  • S-adenosyl methionine
  • Radical oxygen species
  • Interacts with 6th O on guanine
  • Interacts with 3rd O on guanine

Frage 4

Frage
Methylation of guanine results in unstable base pairing
Antworten
  • True
  • False

Frage 5

Frage
Over two cycles of replication, a methylated C-G will be replaced with an?
Antworten
  • A-T
  • C-C
  • G-T

Frage 6

Frage
What protein catalyses Direct Reversal of Guanine methylation?
Antworten
  • Alkyl-Guanine Transferase
  • Adenosyl-Guanine Transferase
  • Adenyl-Guanine Transferase

Frage 7

Frage
The enzyme involved in direct reversal catalyses the transfer of CH3 to the enzyme, killing it
Antworten
  • True
  • False

Frage 8

Frage
How does the Direct Reversal enzyme 'flip out' the damaged guanine?
Antworten
  • A helix-helix motif
  • A helix-turn-helix motif
  • A sheet-turn-sheet motif

Frage 9

Frage
The enzyme for direct reversal is not specific and so works globally
Antworten
  • True
  • False

Frage 10

Frage
What is the reading head of the Direct Reversal enzyme made of?
Antworten
  • Ala & Gly
  • Ser & Val
  • Tyr & Ser

Frage 11

Frage
The enzyme binds to the major groove using an HTH motif
Antworten
  • True
  • False

Frage 12

Frage
Which happens first in the CH3 transfer?
Antworten
  • Lys pushes H onto Tyr
  • Lys pushes CH3 onto Tyr
  • Tyr pushes H onto Lys

Frage 13

Frage
The new H+ pushes e-....
Antworten
  • Onto CH3
  • Onto O bound to CH3
  • Onto Lys bound to CH3

Frage 14

Frage
The e- added to the O pushes the CH3 onto the Lysine
Antworten
  • True
  • False

Frage 15

Frage
Which of the following recognises the widowed G and fills the gap?
Antworten
  • Arg on the head of the reading head
  • Lys on the head of the reading head
  • Val on the head of the reading head

Frage 16

Frage
UV irradiation of _ causes _?
Antworten
  • Consecutive pyrimidines
  • Consecutive purines
  • Opens a 5-6 bond
  • Opens a 3-4 bond
  • Opens a 4-6 bond

Frage 17

Frage
A phosphobutane photo-dimer is formed
Antworten
  • True
  • False

Frage 18

Frage
Why is UV radiation dangerous?
Antworten
  • It alters DNA conformation
  • So helicases make mistakes
  • Bases are deleted
  • Bases are duplicated

Frage 19

Frage
How do 6-4 lesions form?
Antworten
  • An O is transfered from on thymine to another
  • An N is transfered from on thymine to another
  • A C is transfered from on thymine to another

Frage 20

Frage
Damage is recognised by bases
Antworten
  • True
  • False

Frage 21

Frage
How does photolyase work on 6-4 bonds?
Antworten
  • Uses light to reverse the reaction
  • Uses UV to reverse the reaction
  • Binds to DNA and excises damaged bases

Frage 22

Frage
A 'protein wedge' forces DNA apart so it can work
Antworten
  • True
  • False

Frage 23

Frage
An e- from diazaflavin is removed by UV and is passed onto what?
Antworten
  • FADH
  • NAD
  • NADH

Frage 24

Frage
The electron will hopefully break the distorted bonds
Antworten
  • True
  • False

Frage 25

Frage
The photolyase process can only work once
Antworten
  • True
  • False

Frage 26

Frage
Which residues bind to the phosphate backbone in photolyase?
Antworten
  • Glu
  • Arg
  • Gln

Frage 27

Frage
What does the widowed base pair bind to?
Antworten
  • Water
  • Methyl
  • ATP
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