439159
Description
Flashcards by gina_evans0312, updated more than 1 year ago
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Created by gina_evans0312
almost 11 years ago
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| Question | Answer |
| Sequence Identity | A method of finding regions of similarity between proteins, and possibly how closely related they are |
| Sequence Identity Equation | (No of identical residues/No of aligned residues) x 100 |
| Root Mean- Square Deviation | Used to estimate the difference between values predicted by a model and actual values |
| Calculating di between two residues | Sqrt of [(x2-x1) + (y2-y1) + (z2-z1)] |
| RMSD Equation (Once Di is calculated for each aa) | Sum of [(di)^2/no of residue pairs]^1/2 |
| Value of significance for S.I | 35% |
| RMSD Value = Identical Proteins | 0 |
| RMSD Value = Evolutionary Relationship | 4>N |
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