L05 - Mutation and repair:
- Errors and repair;
- Types of mutations;
- Consequences of mutation
L06 - Mutation and phenotypic variation:
- Phenotypic differences can be obtained by:
* Adding sequences to the genome;
* Changing sequences or gene expression;
* Changing the environment
(from end of L05 slides)
In a particular cell, a non Watson-Crick base pair (T-G) is formed during DNA replication. What is likely to happen next?
Responda
Polymerase *probs* removes it, often via 3' exonuclease activity
Polymerase *probs* removes it, often via 5' exonuclease activity
Polymerase *probs* removes it, often via 3' endonuclease activity
Polymerase *probs* removes it, often via 5' endonuclease activity
Questão 2
Questão
(from end of L05 slides)
How does a frameshift mutation differ from a missense mutation?
Responda
Missense affects many codons; Frameshift mutation does not.
Frameshift affects many codons; Missense mutation does not.
Frameshift affects many codons; Missense mutation only affects 3.
Missense affects many codons; Frameshift mutation only affects 3.
Questão 3
Questão
(from end of L05 slides)
Did the fluctuation test show that bacterial cells induce mutation upon exposure to the selective agent (viral infection)? Explain. (well, don’t explain *here*, but be ready to)
Responda
No.
Yes.
Questão 4
Questão
DNA is replicated in:
Responda
S phase
M phase
G phase
Cytokinesis
Telekinesis
Questão 5
Questão
UV:
Responda
light has HIGH energy
light has LOW energy
damage forms a join between two adjacent bases, usually Thymine (forming a Thymine dimer)
damage forms a join between two adjacent bases, usually Cytosine (forming a Cytosine dimer)
damage forms a join between two adjacent bases, usually Adenosine (forming a Adenosine dimer)
damage forms a join between two adjacent bases, usually Guanine (forming a Guanine dimer)
damage forms a join between two adjacent bases, usually Adenine (forming a Adenine dimer)
Questão 6
Questão
Which of the following is NOT a type of DNA mutation (necessarily)?
Responda
Indels
Incels
Transitions
Transversions
Questão 7
Questão
Types of mutations AT THE PROTEIN-CODING LEVEL. Fill in the blanks:
Silent mutation: [blank_start]________________[blank_end];
Missense mutation: [blank_start]________________[blank_end];
Nonsense mutation: [blank_start]________________[blank_end];
Frameshift [blank_start]________________[blank_end].
Responda
bp change, NO amino acid sequence change
bp change, amino acid change
bp change, early stop codon
1bp+ indel, alters reading frame
Questão 8
Questão
UV repair in humans is through:
Responda
Nucleotide excision repair
Enzyme photolyase
Questão 9
Questão
A mutation resulting in COPY NUMBER VARIATION can vary between identical twins. Therefore it happens during:
Gene expression of different members of a gene family varying in different parts of the same plant
Gene expression of different members of a gene family varying in different stages of the same plant's development
Questão 11
Questão
(from end of L06 slides)
Variation in gene regulation = mutations that alter the amount of protein product, without a chance in the amino acid sequence. Basically a regulatory mutation. This can be in which of the following:
Responda
promoters
introns
5’-UTR
3’-UTR
exons
5’-URT
3’-URT
Questão 12
Questão
Blonde vs brown-hair is an example of variation in:
Responda
gene expression
aa sequence
gene splicing
Questão 13
Questão
(from end of L06 slides)
Define a gene family:
Responda
A set of several similar genes, formed by duplication of a single original gene
A set of several copies of identical genes, responsible for varying levels of a single trait
Questão 14
Questão
(from end of L06 slides)
What is a pseudogene?
Responda
A non-functional copy of a gene including a regulatory mutation that prevents its expression
A non-functional copy of a gene including a premature stop codon within the gene that prevents its expression
Questão 15
Questão
(from end of L06 slides)
What are the 2 most likely sources of phenotypic and genomic variation between individuals within a species? (…excluding environmental factors for some reason)
Responda
Variation in amino acid sequences
Regulatory sequences
Variation in gene number
Variation in splicing
Novel genes
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