Protein Structure Pt. 1

Beschreibung

Structural Basis for Biological Function (Basics) Quiz am Protein Structure Pt. 1, erstellt von gina_evans0312 am 21/09/2013.
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Quiz von gina_evans0312, aktualisiert more than 1 year ago
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Zusammenfassung der Ressource

Frage 1

Frage
Which type of protein is conjugated?
Antworten
  • One that contains only amino acid residues
  • One that contains prosthetic groups
  • One that is bound to a membrane

Frage 2

Frage
Which of the following means a protein with two identical subunits?
Antworten
  • Heteromultimer
  • Homomonomer
  • Homomultimer

Frage 3

Frage
Which of the following proteins types tend to have various roles, as opposed to a single, defined one?
Antworten
  • Fibrous
  • Globular
  • Membrane

Frage 4

Frage
Which of the following tend not to be water soluble?
Antworten
  • Fibrous
  • Globular
  • Membrane spanning

Frage 5

Frage
What secondary structures tend to make up fibrous proteins?
Antworten
  • Long strands
  • Long sheets
  • Short strands

Frage 6

Frage
What is specific about the membrane spanning part of membrane proteins?
Antworten
  • They are hydrophobic
  • They are hydrophillic

Frage 7

Frage
Define 'Domain' in reference to protein structure
Antworten
  • Independent folding units of the tertiary structure that have independent functions
  • Independent folding units of tertiary structure that have related functions
  • Dependent folding units of secondary structure that have relation functions
  • Dependent folding units of tertiary structure that have related functions

Frage 8

Frage
Define subunit
Antworten
  • Independent structures in a quaternary structure
  • Independent structures in a tertiary structure
  • Dependent subunits in a quaternary structure

Frage 9

Frage
What can be the result of a single amino acid mutation in collagen?
Antworten
  • Osteoarthritis
  • Osteogenesis imperfecta
  • Osteocalcification

Frage 10

Frage
What is Resonance (as pertaining to protein structure)?
Antworten
  • Where bond pairs cannot be described as a single Lewis Diagram
  • Where two atoms in separate molecules cause each other to vibrate
  • Where two atoms in separate molecules are more likely to bond to each other than to another atom

Frage 11

Frage
Which is the psi bond?
Antworten
  • Between the carbonyl carbon and the alpha carbon
  • Between the alpha carbon and the amide group
  • Between the alpha carbon and the R group

Frage 12

Frage
Which is the phi bond?
Antworten
  • Between the alpha carbon and the amide group
  • Between the alpha carbon and the carbonyl carbon
  • Between the alpha carbon and the R group

Frage 13

Frage
What is Steric clashing?
Antworten
  • Where the charge of an atom prevents it from being close to another
  • Where the electron arrangement of an atom prevents it from being close to another
  • Where the size of an atom prevents it from being close to another

Frage 14

Frage
Why is a peptide bond planar?
Antworten
  • It has a double bond like structure
  • It's electrons clash with that of the psi bond
  • It's electrons clash with the phi bond

Frage 15

Frage
How many residues per turn in an alpha helix?
Antworten
  • 3.4
  • 3.5
  • 3.6

Frage 16

Frage
How much does an alpha helix rise per aa?
Antworten
  • 1.5 angstroms
  • 1.6 angstroms
  • 1.7 angstroms

Frage 17

Frage
Alpha helices are stabilised by hydrogen bonding with what groups?
Antworten
  • Carbonyl oxygen 4 amino acids away
  • Carbonyl oxygen 6 amino acids away
  • Carbonyl oxygen 8 amino acids away

Frage 18

Frage
The stabilising effect of the hydrogen bonds makes a loop of how many atoms?
Antworten
  • 12
  • 13
  • 14

Frage 19

Frage
Which of the following destabilize an alpha helix?
Antworten
  • Glycine
  • Proline
  • Leucine
  • Glutamic acid

Frage 20

Frage
Beta sheets rise by 3.47A per residue in anti-parallel sheets
Antworten
  • True
  • False

Frage 21

Frage
In parallel sheets, there is a rise of .... per residue
Antworten
  • 3.25A
  • 4.25A
  • 2.25A

Frage 22

Frage
3 residues per turn of the strand are pictured as a helix
Antworten
  • True
  • False

Frage 23

Frage
Anti-parallel strands are _ stable than parallel ones
Antworten
  • More
  • Less

Frage 24

Frage
Side chains all point the same way (in the plane of the sheet)
Antworten
  • True
  • False

Frage 25

Frage
What is the role of loops?
Antworten
  • Connecting alpha and beta sheets
  • Connecting alpha helices and alpha helices
  • Connecting beta sheets and beta sheets

Frage 26

Frage
Loops contain mostly hydrophillic residues & are found on the protein surface
Antworten
  • True
  • False

Frage 27

Frage
What is the role of beta turns?
Antworten
  • To allow beta sheets to reverse direction
  • To connect beta sheets together
  • To link protein subunits together

Frage 28

Frage
What two amino acids cannot be contained within a beta sheet?
Antworten
  • Proline
  • Argenine
  • Glycine
  • Valine

Frage 29

Frage
Beta turns link the oxygen of the carbonyl group and the hydrogen of the nitrile group 4 residues away
Antworten
  • True
  • False

Frage 30

Frage
Levinthals Paradox- if a protein folded by trying each fold in a sequence, it would take an impossibly long time to fold correctly. Therefore, protein folding cannot be random or sequential
Antworten
  • True
  • False

Frage 31

Frage
What is this?
Antworten
  • The energy change as proteins fold
  • Gibbs free energy
  • Entropy change

Frage 32

Frage
Why are the internal interactions of protein folding unfavorable?
Antworten
  • It decreases entropy
  • They're hydrophobic in a hydrophillic environment
  • They prevent the protein from folding correctly

Frage 33

Frage
Non-covalent and hydrophobic effects (which effects free water) decrease enthalpy
Antworten
  • True
  • False

Frage 34

Frage
Change in energy during folding = Internal interactions - (Hydrophobic effect + conformational entropy)
Antworten
  • True
  • False

Frage 35

Frage
Proteins fold towards configurations with the...
Antworten
  • lowest energy
  • Highest energy
  • Easiest energy to reach (energy closest to that of unfolded protein)

Frage 36

Frage
What can slow the progress of protein folding?
Antworten
  • A local low energy minimum
  • A local high energy minimum

Frage 37

Frage
What is nucleation?
Antworten
  • Reversible secondary structure formation
  • Reversible tertiary structure formation
  • Reversible quaternary structure formation

Frage 38

Frage
Which of the following happens after nucleation?
Antworten
  • The secondary structure aggregation forms a molten globular intermediate
  • Domains adjust to the lowest energy form

Frage 39

Frage
The protein is capable of conformational change after forming
Antworten
  • True
  • False
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