Pregunta 1
Pregunta
Which of the following is not a role of the DNAK/Hsp70 superfamily?
Respuesta
-
Stabilise nascent polypeptides
-
Repaor heat shocked proteins
-
Preserve folding proteins
-
Protein transport
-
Protein degredation
Pregunta 2
Pregunta
Hsp70s (unlike DNAK's) do not require chaperones
Pregunta 3
Pregunta
What is the role of DNAJ/Hsp40 when combined with DNAK/Hsp70
Pregunta 4
Pregunta
DNAK/Hsp70 need NEF's in order to function
Pregunta 5
Pregunta
Where is the Hsp70/DNAK binding domain for ATP?
Respuesta
-
N-terminus
-
Core
-
C- terminus
Pregunta 6
Pregunta
Name the subdomains of the ATPase found in DNAK/Hsp70
Pregunta 7
Pregunta
What increases the ATPase activity of the ATP binding domain?
Pregunta 8
Pregunta
The core substrate binding domain has an affinity for what?
Respuesta
-
Neutral, hydrophobic aa
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Acidic, polar aa
-
Basic, polar aa
Pregunta 9
Pregunta
The C-terminus of DNAK/Hsp 70 acts as a 'lid' for the protein
Pregunta 10
Pregunta
When ATP is hydrolysed in DNAK/Hsp70, where does the C-terminus bind to?
Respuesta
-
The N-terminus
-
The core
-
It doesn't move at all
-
Over the bound substrate
Pregunta 11
Pregunta
Without the assistance of DNAJ/Hsp40, the ATPase in DNAK/Hsp70 works too slowly for the C-terminus to trap the bound substrate
Pregunta 12
Pregunta
Hsp70/DNAK's preferred binding pattern is 15 aa long
Pregunta 13
Pregunta
What are the 'Flanking' residues (1-4, 9-13) of Hsp70's preferred binding site made of?
Pregunta 14
Pregunta
The preferred residue for the -Core- of Hsp70's preferred binding site is Valine
Pregunta 15
Pregunta
What other residues can make up the 'core' of the preferred binding site/
Pregunta 16
Pregunta
How does this 'Preferred Binding Patter' for Hsp70 help direct the protein?
Respuesta
-
In properly folded proteins, the hydrophobic stretch is hidden, and so only nascent/denatured proteins have the exposed residues for Hsp70 to bind to
-
In nascent/denatured proteins, these hydrophobic residues will be added by Hsp40, so it can recognise them
-
Stretches with the core residues are removed during protein folding, so only nascent polypeptides have them
Pregunta 17
Pregunta
What is the role of the J domain in a Hsp40?
Respuesta
-
Contain the HPD peptide needed to boost Hsp40's ATPase
-
Gly/Phe rich linker for positioning
-
Dimerisation domain
-
Zn+ 'finger' for substrate binding
Pregunta 18
Pregunta
The role of the Gly/Phe rich linker does what?
Respuesta
-
Makes DNAJ/Hsp40 flexible enough to bind to its respective protein
-
Makes DNAJ/Hsp40 a more effective ATPase
-
Allows DNAJ/Hsp40 to locate its respective DNAK/Hsp70
Pregunta 19
Pregunta
The Zinc 'Finger' is for substrate binding
Pregunta 20
Pregunta
Which amino acids make up the HPD domain?
Respuesta
-
Histadine
-
Proline
-
Aspartate
-
Leucine
-
Glycine
Pregunta 21
Pregunta
The Znc finger of DNAJ/Hsp40 can interact with the nascent polypeptide and bring it to the DNAK/Hsp70
Pregunta 22
Pregunta
What is the sequence of the Zinc 'finger'?
Respuesta
-
CXXCXGXG
-
GXXGXCXC
-
GXXCXGXC
-
CXXGXCXG
Pregunta 23
Pregunta
The C-terminus of Hsp40 is for tetramerisation
Pregunta 24
Pregunta
What effect does the GEF factor binding have on the Hsp70/Hsp40 complex?
Pregunta 25
Pregunta
When the substrate & Hsp40 bind to Hsp70, the GEF factor also binds
Pregunta 26
Pregunta
How is the nascent polypeptide transferred from the DNAJ site to the DNK site?
Respuesta
-
The G/F domain is flexible enough to bind to the DNAK site and pull it in for transfer
-
The J domain is pulled like a thread through the ATPase, bringing the two sites close enough together for transfer
-
The dimerisation of the DNAJ pulls the two sites close together
Pregunta 27
Pregunta
In which of the following is Prefoldin found?
Respuesta
-
Archea
-
Prokaryotes
-
Eukaryotes
Pregunta 28
Pregunta
Prefoldin can act as a substitute for Hsp70 if the organsim doesn't have the latter
Pregunta 29
Pregunta
Prefoldin is ATP dependent
Pregunta 30
Pregunta
Prefolding is a...
Pregunta 31
Pregunta
What is the role of Preofoldin in Archea?
Respuesta
-
Captures nascent polypeptides and binds them to Gro-El
-
Captures nascent polypeptides and binds them to CCT
-
Captures nascent polypeptides and binds them to SSA
Pregunta 32
Pregunta
In Eukaryotes, prefoldin might be specific for the folding of what?
Respuesta
-
Actin/tubulin
-
CCT
-
Hsp40
-
Hsp70
Pregunta 33
Pregunta
In archea there are 6 Prefoldin genes (Grim1-6) in Eukaryotes there are 2 (Gimalpha and Gimbeta)
Pregunta 34
Pregunta
Which of the following describe Prefoldin
Pregunta 35
Pregunta
There are 3.5 amino acid residues per helical turn of the coiled coil helices in Prefoldin (not 3.6)
Pregunta 36
Pregunta
The subunits forming the dimerisation interface of the below molecule are what?
Pregunta 37
Pregunta
Where do the non-native proteins bind to Prefoldin?
Respuesta
-
Exposed hydrophobic residues in the distal ends of the 'tentacle'
-
Exposed hydrophobic residues in the proximal ends of the 'tentacle'
-
Exposed hydrophobic residues at the top of the 'tentacle'