Biosynthesis of Natural Products

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For the module: Natural Products & Biotechnology, in which understanding of natural product biosynthesis is required.
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Pregunta Respuesta
What components are lipids made out of? Glycerol and straight-chain fatty acids
How are lipids biosynthesised? Condensation and reduction of acetyl coA
What main enzymes are used to synthesise fatty acids? Multi-domain fatty acid synthases, such as ketosynthase
What enzymes are used to modify fatty acid chains? Elongases (length), desaturases (unsaturated)
What enzymes tailor fatty acids into waxes and esters? Acyltransferase
What other examples of acyl-CoAs are there? Give the amino acids they're derived from and their branch structure. 1. Isovaleryl, from leucine (iso-branched) 2. 2-methylbutyryl, from isoleucine (anteiso-branched) 3. Propionyl, from threonine (odd-chain) 4. Isobutyryl, from valine (iso-branched)
How are polyketides recognisable? Heavily cyclised 1,3 pattern of oxygen atoms Alternating double bonds
How are polyketides biosynthesised? Condensation and reduction of acyl-CoA, though the degree of reduction and the acyl-CoA used differs from lipids
Which two main enzymes are used to biosynthesise polyketides? Polyketide synthases (PKS) 1. Type 1 PKS = multidomain 2. Type 2 PKS = multi-enzymatic
Which five tailoring enzymes make further modifications to polyketides? Cyclases Acyltransferases Methyltransferases Oxygenases Glycosyltransferase
What are peptides made out of? Derived from 20 naturally-occurring amino acids and a carboxylic acid
How are peptides identifiable? Amide bonds
How are peptides biosynthesised? Ribosomally -> Structural gene Non-ribosomally -> NR peptide synthase
What 2 tailoring enzymes modify peptides? Oxidases, transferases
What are terpenoids composed of? Isoprenyl pyrophosphates
How are terpenes recogniseable? Repeating isoprene units (5n)
Which two biosynthetic pathways are terpenoids made from? Mevalonate pathway from ACoA MEP pathway from glycolysis
Give an example of a monoterpene and a tetraterpene Monoterpene: limonene Tetraterpene: Astaxanthin (carotenoid)
Which enzymes biosynthesise terpenoid precursors? Isoprenyl phosphate synthases
Which enzymes biosynthesise individual terpenes? Terpene synthases
Which tailoring enzymes modify terpenes? Terpene cyclases Oxygenases
How are phenylpropanoids recognisable? Propylbenzene units 1,2 pattern of oxygen atoms
Give an example of a phenylpropanoid? Flavonoids, found in fruit and vegetables
Which biosynthetic pathway are phenylpropanoids synthesised from? Shikimate pathway, to form aromatic amino acids
How are alkaloids recognisable? Non-amide nitrogen atoms present
How are alkaloids biosynthesised? Amino acid biosynthesis Nucleobases
Which enzymes are involved in the biosynthesis of alkaloids? Decarboxylases
Give examples of alkaloids Nicotine, morphine, mescaline
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